Jonas De Vylder

Publications

• Convolutional Neural Network Pruning to Accelerate Membrane Segmentation in Electron Microscopy
• Accurate detection of dysmorphic nuclei using dynamic programming and supervised classification
• Automated Membrane Detection in Electron Microscopy using Convolutional Neural Networks
• Bayesian Deconvolution of Scanning Electron Microscopy Images Using Point-spread Function Estimation and Non-local Regularization
• Decreasing Time Consumption of Microscopy Image Segmentation Through Parallel Processing on the GPU
• From a biological sample to high-quality digital image representation: avoiding and restoring image artifacts through proper acquisition and image restoration
• GPU Accelerated Compressive Sensing in MRI
• Image Restoration Using Deep Learning
• Image degradation in microscopic images: avoidance, artifacts and solutions
• MATE: Machine Learning for Adaptive Calibration Template Detection
• Quasar tutorial: High-level programming of Heterogeneous Hardware
• Quasar: A Programming Framework for Rapid Prototyping
• Quasar: rapid prototyping for image/video processing on heterogeneous hardware.
• Real-time Machine Vision with GPU-acceleration using Quasar
• Real-time depth estimation and view interpolation using Quasar
• Semi-automated segmentation in 3D electron microscopy imaging
• Superpixel quality in microscopy images: the impact of noise & denoising
• Demo: Quasar - A New programming Framework for Real-time Image/Video Processing on GPU and CPU
• The application of Big Data Analysis techniques in GSR research : a novel approach to an ever evolving forensic discipline.
• Rotational Fusion and Extended Depth of Field for a Single Cell Layer in Differential Interference Contrast Microscopic Images
• Noise Analysis in 3D Electron Microscopy
• A Probabilistic Interpretation of Geometric Active Contour Segmentation
• Image Optimization for 3D Electron Microscopy Images
• The image processing revolution: the next step in electron microscopy
• Average Track Estimation of Moving Objects Using RANSAC and DTW
• Biological image analysis
• Noise Analysis and Removal in 3D Electron Microscopy
• Rotation and focal depth fusion of DIC microscopic images
• Leaf segmentation and parallel phenotyping for the analysis of gene networks in plants
• A Novel Tracing Method for the Segmentation of Cell Wall Networks
• Computationally Efficient Locally Adaptive Demosaicing of Color Filter Array Images using the Dual-Tree Complex Wavelet Packet Transform
• Multiple Leaf Tracking Using Computer Vision Methods with Shape Constraints
• A Novel Dictionary Based Computer Vision Method for the Detection of Cell Nuclei
• Brain Blood Vessel Segmentation Using Line-shaped Profiles
• Combined Non-Local and Multi-Resolution Sparsity Prior in Image Restoration
• Dynamic Subsampling for Image Registration Speedup Using the Mutual Information Variance Estimate
• Rosette Tracker: an open source image analysis tool for automatic quantification of genotype effects
• A Novel Dictionary Based Detection Method for Cell Nuclei
• Cell nuclei detection using globally optimal active contours with shape prior
• A non-rigid registration method for multispectral imaging of plants
• Rosette Tracker: an open source image analysis tool for automatic quantification of genotype effects
• A comparative study on the optimization of global optimum active contours
• Leaf Segmentation and Tracking Using Probabilistic Parametric Active Contours
• Convex formulation and global optimization for multimodal active contour segmentation
• Robust Active Contour Segmentation with an Efficient Global Optimizer
• 2D mapping of strongly deformable cell nuclei-based on contour matching
• Computational efficient segmentation of cell nuclei in 2D and 3D fluorescent micrographs
• Non-rigid registration using mutual information minimizing splines
• 2D Mapping of pathological nuclei
• A fast external force field for parametric active contour segmentation
• A Computational Efficient Energy for Active Contour Segmentation Using Edge Propagation
• 2D Mapping of Strongly Deformed Cell Nuclei Based on Contour Warping
• 2D mapping of cell nuclei based on contour warping
• Segmentation of cell nuclei in Arabidopsis Thaliana Roots
• Automatic analysis of biological images
• Automatic Detection of Cell Nuclei in Fluorescence Micrographs
• 2-D Shape Representation Using Improved Fourier Descriptors
• Tracking Multiple Objects Using Intensity-GVF Snakes
• Tracking Multiple Objects Using Moving Snakes
• Improved Fourier Descriptors For 2D Shape Representation
• Improved Fourier Descriptors for 2D Shape Representation
• Characterization and recognition of cell structures in biomedical images